Input file to transform (separated by blanks) [mzML,featureXML,consensusXML,idXML,opt.]Transformation to apply [trafoXML]Output file (same file type as 'in'). Either this option or 'trafo_out' has to be provided; they can be used together. [mzML,featureXML,consensusXML,idXML,Inactive]Transformation output file. Either this option or 'out' has to be provided; they can be used together. [trafoXML,Inactive]The text sent to standard out during the execution of MapRTTransformer.The text sent to standard error during the execution of MapRTTransformer. (If it appears in gray, it's the output of a previously failing run which is preserved for your trouble shooting.)